While troubleshooting an issue with my Doxie Go scanner, I needed to remove and re-install the Eye-Fi Center software. Even though the application was successfully removed, the Eye-Fi Helper app in the Windows System Tray kept reporting that it had received X files to date. This should have dropped back down to zero. Turns out, you have to delete the C:\Users\Username\AppData\Roaming\Eye-Fi
folder as well to completely remove the Eye-Fi apps from your computer and reset all of the counters.